Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015945335.1_cds_XP_016487870.1_78561
CDS Infomation

[gene=LOC107807927] [db_xref=GeneID:107807927] [protein=SEC1 family transport protein SLY1-like isoform X2] [protein_id=XP_016487870.1] [location=complement(4875..6389)] [gbkey=CDS]
Sequence

ATGAGACATGTTTTTGGTTTAGGGATGATTAATTCAGAGTCGATTGAGAGGATTGTGAAA
GTGCATGATCAGTACTTGGAGTTTATCACGCTTGATGATAATTTGTTCTCCCTTGCCAAC
AAGAACTGTTATGTTCAGTTAAATGATCCCTCAGCTGGGGATAACGAAATTGATGAGATC
ATTGAAAATATTGTGAGTGGGTTGTTTTGTGTGTTGGCTACTCTTGCTGTTGTCCCTGTC
ATCAGGTGTCCTCGTGGTGGGCCTGCTGAGATGGTGGCATCCCTGTTGGATCAGAGACTG
CGGGACCATTTGCTGGCGAAGAACAATTTGTTTTCAGAGGGTGGGAATTTGACTAGCTCA
TTTCAGAGGCCAGTTTTGTGTTTATTTGATCGGAACTTTGAATTGGCAGTGGCAATACAG
CATGATTTTAGGTATAGGCCACTTGTTCATGATGTGCTTGGGTTGAGATTGAACAGATTA
AGCGTGCCAGGAGACAAGGGTGGGATGAAATCCTATGAGTTAGATAGGTCTGATCCATTT
TGGATGGCCAACGGGTCATTGGAATTTCCAGAGGTTGCAGTGGAGATAGAGTCTCAATTG
AATAAATACAAGAAGGATGTTGAGGAGGTAAATCAACGAACAGGTGGGAGTGGAGGGGCC
GAGTTTGATGGAACAGATTTGGTAGGTAATACTAAACATTTGATGAATGCTGTAAATTCC
CTACCTGAGTTGACTGAGCGAAAGCAAGTGATTGATAAGCACACAAATATTGCTACTTCA
TTATTGAGCGAGATCAAGGAGAGATCCCTCGATTCATATGCTAAAACAGAGAGGGATATG
CTGGTGAGAGGTGGCATTGATCGTAATGAGCTCCTTGGAGTGCTGAAGGGAAAAGGGAGT
AAGGCGGATAAGCTGCGATTCGCTATAATTTATCTTATCTCAACTGAAAGCATGCCTCAA
TCTGAAGTCGAAATGATTGAAGCAGCACTTAGGGAGTCCGAGGTTGATACCAGTGCTTTT
CAGTATGTAAAGAAGATAAAATCATTGAATGTCTCTTTTGCATCAGCAAATTCTGCAAGT
ACGAGCAACATTGTTGATTGGGCTGAAAAACTCTACGGGCAGTCAATCAGTGCTGTAACT
GCAGGTGTGAAGAATCTATTATCCAGTGATCATCAGTTGGCTTTGACGAGAGCAGTAGAA
TCGTTAATGGAGGGGAAACCAAATCCTGAAATTGAATCTTATCTTCTTCTTGATCCTCGT
GCACCGAAGTCAAGCTCTGCATCTAGCAGCAGTCATCTAAAAGGACCATTTAAAGAAGCT
ATAGTCTTTATGATAGGTGGTGGAAATTACGTGGAGTATGGAAGCTTGCAAGAGCTTGCC
AATCGCCAACAGCCGGTCAAGCATGTCATATACGGGGCAACAGAAATTCTTACAGGAGGT
GAGTTCATTGAGCAGCTTGCAGTATTGGGGCAGAAGATGGGATTGGGAAGCAGTGGGGCT
GCACCTCCCCATTGA

Peptide Sequence

PEP ID

XP_016487870.1
PEP Infomation

PREDICTED: SEC1 family transport protein SLY1-like isoform X2 [Nicotiana tabacum]
Sequence

MRHVFGLGMINSESIERIVKVHDQYLEFITLDDNLFSLANKNCYVQLNDPSAGDNEIDEI
IENIVSGLFCVLATLAVVPVIRCPRGGPAEMVASLLDQRLRDHLLAKNNLFSEGGNLTSS
FQRPVLCLFDRNFELAVAIQHDFRYRPLVHDVLGLRLNRLSVPGDKGGMKSYELDRSDPF
WMANGSLEFPEVAVEIESQLNKYKKDVEEVNQRTGGSGGAEFDGTDLVGNTKHLMNAVNS
LPELTERKQVIDKHTNIATSLLSEIKERSLDSYAKTERDMLVRGGIDRNELLGVLKGKGS
KADKLRFAIIYLISTESMPQSEVEMIEAALRESEVDTSAFQYVKKIKSLNVSFASANSAS
TSNIVDWAEKLYGQSISAVTAGVKNLLSSDHQLALTRAVESLMEGKPNPEIESYLLLDPR
APKSSSASSSSHLKGPFKEAIVFMIGGGNYVEYGSLQELANRQQPVKHVIYGATEILTGG
EFIEQLAVLGQKMGLGSSGAAPPH

Transcript Sequence

Gene sequence data has not been registered.